Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| csgg/hfab family protein | CE139_RS02590 | Not Available | Negative | 561894 - 562733 | 30106.1 |
| curli assembly protein csgf | CE139_RS02595 | Not Available | Negative | 562749 - 563156 | 14446.8 |
| curli production assembly/transport protein csge | CE139_RS02600 | Not Available | Negative | 563153 - 563536 | 14748.5 |
| helix-turn-helix transcriptional regulator | CE139_RS02605 | Not Available | Negative | 563533 - 564159 | 22666.6 |
| sis domain-containing protein | CE139_RS02610 | Not Available | Negative | 564381 - 565391 | 35336.7 |
| sigma-54-dependent transcriptional regulator | CE139_RS02615 | Not Available | Negative | 565518 - 566954 | 51868.3 |
| atp-binding protein | CE139_RS02620 | Not Available | Negative | 566984 - 568798 | 66947.4 |
| hypothetical protein | CE139_RS02625 | Not Available | Positive | 568998 - 569198 | 6599.86 |
| hypothetical protein | CE139_RS02630 | Not Available | Positive | 569269 - 569517 | 8103.52 |
| voc family protein | CE139_RS02635 | Not Available | Positive | 569626 - 570957 | 48717.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





