Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit alpha/fixb family protein | CE139_RS02540 | Not Available | Positive | 552801 - 554036 | 44068.9 |
| electron transfer flavoprotein subunit beta | CE139_RS02545 | Not Available | Positive | 554026 - 554826 | 27712.5 |
| fita-like ribbon-helix-helix domain-containing protein | CE139_RS02550 | Not Available | Positive | 555016 - 555270 | 9568.52 |
| type ii toxin-antitoxin system vapc family toxin | CE139_RS02555 | Not Available | Positive | 555267 - 555686 | 15173.3 |
| dna polymerase i | CE139_RS02560 | Not Available | Negative | 555872 - 558616 | 99929.3 |
| duf2782 domain-containing protein | CE139_RS02565 | Not Available | Positive | 558728 - 559018 | 10570.8 |
| homoserine kinase | CE139_RS02570 | Not Available | Positive | 559081 - 560034 | 35229.3 |
| hypothetical protein | CE139_RS02575 | Not Available | Negative | 560066 - 560398 | 11496.8 |
| hypothetical protein | CE139_RS02580 | Not Available | Negative | 560395 - 561315 | 31273.3 |
| curli fiber surface-exposed nucleator csgb | CE139_RS02585 | Not Available | Negative | 561339 - 561785 | 15364.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





