Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | CE139_RS13355 | Not Available | Positive | 2862854 - 2863084 | 7936.39 |
| Phage head-tail connector | CE139_RS13360 | Not Available | Positive | 2863088 - 2863564 | 17076.4 |
| Putative head-tail adaptor | CE139_RS13365 | Not Available | Positive | 2863564 - 2863893 | 12140.3 |
| Hypothetical protein | CE139_RS13370 | Not Available | Positive | 2863903 - 2864403 | 18100.7 |
| Gp11 | CE139_RS13375 | Not Available | Positive | 2864403 - 2864768 | 13417.6 |
| Putative major tail protein | CE139_RS25520 | Not Available | Positive | 2864831 - 2865553 | 23861.2 |
| Tail assembly chaperone | CE139_RS13385 | Not Available | Positive | 2865563 - 2865913 | 12258.7 |
| Tail protein gpt-like protein | CE139_RS13390 | Not Available | Positive | 2865946 - 2866209 | 9902.69 |
| Tail tape measure protein | CE139_RS13395 | Not Available | Positive | 2866260 - 2868800 | 88883.8 |
| Tail protein | CE139_RS13400 | Not Available | Positive | 2868800 - 2869687 | 30788.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





