Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | CE139_RS02490 | Not Available | Negative | 541067 - 542056 | 35011.2 |
| thioesterase family protein | CE139_RS02495 | Not Available | Negative | 542053 - 542523 | 17471.0 |
| l-carnitine dehydrogenase | CE139_RS02500 | Not Available | Negative | 542532 - 543476 | 33850.5 |
| 3-keto-5-aminohexanoate cleavage protein | CE139_RS02505 | Not Available | Negative | 543473 - 544360 | 31285.9 |
| choline abc transporter substrate-binding protein | CE139_RS02510 | Not Available | Negative | 544380 - 545315 | 33675.8 |
| glxa family transcriptional regulator | CE139_RS02515 | Not Available | Positive | 545471 - 546457 | 36059.4 |
| dipeptidase | CE139_RS02520 | Not Available | Positive | 546589 - 547566 | 35935.1 |
| duf5943 domain-containing protein | CE139_RS02525 | Not Available | Positive | 547755 - 548285 | 19970.7 |
| dimethylglycine demethylation protein dgca | CE139_RS02530 | Not Available | Positive | 548390 - 550450 | 75861.9 |
| dimethylglycine demethylation protein dgcb | CE139_RS02535 | Not Available | Positive | 550634 - 552625 | 71857.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





