Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | CE139_RS02345 | Not Available | Negative | 517227 - 518729 | 53278.9 |
| lysr family transcriptional regulator | CE139_RS02350 | Not Available | Positive | 518986 - 519939 | 35135.0 |
| dmt family transporter | CE139_RS02355 | Not Available | Positive | 520183 - 521172 | 34925.7 |
| 4-hydroxybenzoate octaprenyltransferase | CE139_RS02360 | Not Available | Negative | 521157 - 522104 | 34858.0 |
| chorismate--pyruvate lyase family protein | CE139_RS02365 | Not Available | Negative | 522135 - 522737 | 21524.5 |
| duf2780 domain-containing protein | CE139_RS02370 | Not Available | Negative | 522721 - 523290 | 18884.6 |
| nucleoside recognition domain-containing protein | CE139_RS02375 | Not Available | Positive | 523418 - 524647 | 43254.9 |
| hypothetical protein | CE139_RS02380 | Not Available | Negative | 524629 - 525297 | 25437.3 |
| duf1161 domain-containing protein | CE139_RS02385 | Not Available | Positive | 525445 - 525675 | 8217.97 |
| hypothetical protein | CE139_RS02390 | Not Available | Positive | 525779 - 525955 | 6963.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





