Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase family protein | CE139_RS02295 | Not Available | Positive | 506628 - 507584 | 32943.5 |
| fggy family carbohydrate kinase | CE139_RS02300 | Not Available | Positive | 507625 - 509097 | 51658.7 |
| atp-binding protein | CE139_RS02305 | Not Available | Negative | 509402 - 511192 | 66188.0 |
| sigma-54-dependent response regulator transcription factor algb | CE139_RS02310 | Not Available | Negative | 511189 - 512538 | 49210.9 |
| hypothetical protein | CE139_RS02315 | Not Available | Positive | 512980 - 513234 | 8874.81 |
| hypothetical protein | CE139_RS02320 | Not Available | Positive | 513245 - 513466 | 7958.0 |
| duf1328 domain-containing protein | CE139_RS02325 | Not Available | Positive | 513496 - 513657 | 5717.46 |
| hlyd family secretion protein | CE139_RS02330 | Not Available | Negative | 513974 - 514873 | 33308.0 |
| duf1656 domain-containing protein | CE139_RS02335 | Not Available | Negative | 514884 - 515084 | 7425.54 |
| fusc family protein | CE139_RS02340 | Not Available | Negative | 515074 - 517230 | 78037.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





