Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | CE139_RS02150 | Not Available | Positive | 475121 - 476242 | 39035.9 |
| (2fe-2s)-binding protein | CE139_RS02155 | Not Available | Positive | 476236 - 476472 | 8378.27 |
| fad/nad(p)-binding oxidoreductase | CE139_RS02160 | Not Available | Positive | 476469 - 477704 | 43042.0 |
| arac family transcriptional regulator | CE139_RS02165 | Not Available | Positive | 477701 - 478492 | 29007.0 |
| dihydrodipicolinate synthase family protein | CE139_RS02170 | Not Available | Positive | 478489 - 479409 | 33052.8 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | CE139_RS02175 | Not Available | Positive | 479688 - 480182 | 17063.7 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | CE139_RS02180 | Not Available | Positive | 480179 - 481261 | 38446.0 |
| glsb/yeaq/ymge family stress response membrane protein | CE139_RS02185 | Not Available | Positive | 481390 - 481638 | 8529.04 |
| duf3299 domain-containing protein | CE139_RS02190 | Not Available | Positive | 481806 - 482354 | 19800.8 |
| response regulator | CE139_RS02195 | Not Available | Negative | 482546 - 483658 | 40655.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





