Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase, t2ss/t4p/t4ss family | CE139_RS25030 | Not Available | Positive | 5416168 - 5417103 | 33624.3 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | CE139_RS25035 | Not Available | Positive | 5417100 - 5418578 | 50756.4 |
| type iv pilus biogenesis protein pilm | CE139_RS25040 | Not Available | Positive | 5418710 - 5419129 | 14426.9 |
| dna topoisomerase iii | CE139_RS25045 | Not Available | Positive | 5419248 - 5421203 | 71079.6 |
| hypothetical protein | CE139_RS25050 | Not Available | Negative | 5421248 - 5423488 | 83478.3 |
| hypothetical protein | CE139_RS25055 | Not Available | Positive | 5424566 - 5424985 | 15444.6 |
| hypothetical protein | CE139_RS25060 | Not Available | Positive | 5425062 - 5425238 | 6256.76 |
| hypothetical protein | CE139_RS25500 | Not Available | Positive | 5425240 - 5425365 | 4652.77 |
| hypothetical protein | CE139_RS25065 | Not Available | Positive | 5425479 - 5425751 | 9725.06 |
| duf3577 domain-containing protein | CE139_RS25070 | Not Available | Positive | 5426358 - 5426572 | 8032.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





