Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS24980 | Not Available | Negative | 5407732 - 5407992 | 10379.4 |
| hypothetical protein | CE139_RS24985 | Not Available | Negative | 5408097 - 5408546 | 17567.7 |
| single-stranded dna-binding protein | CE139_RS24990 | Not Available | Negative | 5408786 - 5409250 | 17229.0 |
| duf3158 family protein | CE139_RS24995 | Not Available | Negative | 5409252 - 5409827 | 21321.6 |
| pfl_4669 family integrating conjugative element protein | CE139_RS25000 | Not Available | Negative | 5409833 - 5410630 | 29082.4 |
| sty4528 family pathogenicity island replication protein | CE139_RS25005 | Not Available | Negative | 5411213 - 5412508 | 47537.3 |
| duf2857 domain-containing protein | CE139_RS25010 | Not Available | Negative | 5412505 - 5412978 | 17615.9 |
| gspe/pule family protein | CE139_RS25015 | Not Available | Positive | 5413079 - 5414521 | 52627.8 |
| type ii secretion system f family protein | CE139_RS25020 | Not Available | Positive | 5414511 - 5415602 | 39970.3 |
| type 4 pilus major pilin | CE139_RS25025 | Not Available | Positive | 5415637 - 5416161 | 17699.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





