Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis protein pilm | CE139_RS25955 | Not Available | Negative | 5388990 - 5389094 | 3385.09 |
| type iv pilus biogenesis protein pilm | CE139_RS24885 | Not Available | Negative | 5389046 - 5389420 | 13665.3 |
| tonb-dependent siderophore receptor | CE139_RS24890 | Not Available | Negative | 5389579 - 5391705 | 78455.5 |
| glycosyltransferase | CE139_RS24895 | Not Available | Negative | 5391888 - 5392763 | 33448.4 |
| glycosyltransferase family 2 protein | CE139_RS24900 | Not Available | Negative | 5392768 - 5393685 | 34306.7 |
| type iv pilus biogenesis protein pilm | CE139_RS24905 | Not Available | Negative | 5394046 - 5394483 | 14933.7 |
| hypothetical protein | CE139_RS24910 | Not Available | Negative | 5394487 - 5394705 | 8217.95 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | CE139_RS24915 | Not Available | Negative | 5394715 - 5396145 | 49972.4 |
| atpase, t2ss/t4p/t4ss family | CE139_RS24920 | Not Available | Negative | 5396142 - 5397077 | 33608.3 |
| type 4 pilus major pilin | CE139_RS24925 | Not Available | Negative | 5397084 - 5397608 | 17729.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





