Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2857 domain-containing protein | CE139_RS24740 | Not Available | Negative | 5355338 - 5355664 | 11985.6 |
| gtp-binding protein | CE139_RS24745 | Not Available | Negative | 5355765 - 5356093 | 11691.8 |
| elongation factor g | CE139_RS24750 | Not Available | Negative | 5356122 - 5358224 | 77042.3 |
| 30s ribosomal protein s7 | CE139_RS24755 | Not Available | Negative | 5358255 - 5358728 | 17753.7 |
| 30s ribosomal protein s12 | CE139_RS24760 | Not Available | Negative | 5358815 - 5359186 | 13786.8 |
| dna-directed rna polymerase subunit beta' | CE139_RS24765 | Not Available | Negative | 5359352 - 5363551 | 154638.0 |
| dna-directed rna polymerase subunit beta | CE139_RS24770 | Not Available | Negative | 5363614 - 5367687 | 150885.0 |
| 50s ribosomal protein l7/l12 | CE139_RS24775 | Not Available | Negative | 5367913 - 5368281 | 12584.3 |
| 50s ribosomal protein l10 | CE139_RS24780 | Not Available | Negative | 5368361 - 5368861 | 17558.2 |
| 50s ribosomal protein l1 | CE139_RS24785 | Not Available | Negative | 5369070 - 5369765 | 24314.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





