Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l30 | CE139_RS24640 | Not Available | Negative | 5346425 - 5346607 | 6629.22 |
| 30s ribosomal protein s5 | CE139_RS24645 | Not Available | Negative | 5346610 - 5347110 | 17604.4 |
| 50s ribosomal protein l18 | CE139_RS24650 | Not Available | Negative | 5347114 - 5347464 | 12763.5 |
| 50s ribosomal protein l6 | CE139_RS24655 | Not Available | Negative | 5347475 - 5348008 | 19095.2 |
| 30s ribosomal protein s8 | CE139_RS24660 | Not Available | Negative | 5348020 - 5348412 | 14016.2 |
| 30s ribosomal protein s14 | CE139_RS24665 | Not Available | Negative | 5348575 - 5348880 | 11506.1 |
| 50s ribosomal protein l5 | CE139_RS24670 | Not Available | Negative | 5348894 - 5349433 | 20337.9 |
| 50s ribosomal protein l24 | CE139_RS24675 | Not Available | Negative | 5349453 - 5349767 | 11443.1 |
| 50s ribosomal protein l14 | CE139_RS24680 | Not Available | Negative | 5349780 - 5350148 | 13398.7 |
| 30s ribosomal protein s17 | CE139_RS24685 | Not Available | Negative | 5350161 - 5350427 | 10074.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





