Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter substrate-binding domain-containing protein | CE139_RS02050 | Not Available | Negative | 451819 - 452640 | 29379.9 |
| homocysteine s-methyltransferase family protein | CE139_RS02055 | Not Available | Positive | 452741 - 453643 | 31688.7 |
| sdr family oxidoreductase | CE139_RS02060 | Not Available | Negative | 453720 - 454472 | 25953.0 |
| lysr family transcriptional regulator | CE139_RS02065 | Not Available | Positive | 454573 - 455490 | 33598.4 |
| citmhs family transporter | CE139_RS02070 | Not Available | Positive | 455757 - 457091 | 47786.7 |
| terc family protein | CE139_RS02075 | Not Available | Positive | 457208 - 457960 | 27556.7 |
| na/pi cotransporter family protein | CE139_RS02080 | Not Available | Positive | 458125 - 459795 | 60052.2 |
| class c beta-lactamase | CE139_RS02085 | Not Available | Negative | 460051 - 461205 | 40895.9 |
| d-hexose-6-phosphate mutarotase | CE139_RS02090 | Not Available | Positive | 461377 - 462279 | 33112.2 |
| asparaginase | CE139_RS02095 | Not Available | Negative | 462845 - 463828 | 33259.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





