Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yccs family putative transporter | CE139_RS24590 | Not Available | Negative | 5337505 - 5339709 | 81465.4 |
| catalase | CE139_RS24595 | Not Available | Negative | 5339856 - 5341313 | 54506.9 |
| 50s ribosomal protein l17 | CE139_RS24600 | Not Available | Negative | 5341506 - 5341895 | 14519.7 |
| dna-directed rna polymerase subunit alpha | CE139_RS24605 | Not Available | Negative | 5341940 - 5342941 | 36697.9 |
| 30s ribosomal protein s4 | CE139_RS24610 | Not Available | Negative | 5342964 - 5343584 | 23244.1 |
| 30s ribosomal protein s11 | CE139_RS24615 | Not Available | Negative | 5343601 - 5343990 | 13644.4 |
| 30s ribosomal protein s13 | CE139_RS24620 | Not Available | Negative | 5344021 - 5344377 | 13421.6 |
| 50s ribosomal protein l36 | CE139_RS24625 | Not Available | Negative | 5344508 - 5344624 | 4434.66 |
| preprotein translocase subunit secy | CE139_RS24630 | Not Available | Negative | 5344655 - 5345986 | 47961.7 |
| 50s ribosomal protein l15 | CE139_RS24635 | Not Available | Negative | 5345987 - 5346421 | 15201.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





