Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CE139_RS24540 | Not Available | Positive | 5329491 - 5330138 | 23238.0 |
| thioredoxin | CE139_RS24545 | Not Available | Positive | 5330207 - 5331076 | 31941.1 |
| hypothetical protein | CE139_RS24550 | Not Available | Negative | 5331204 - 5331560 | 12586.3 |
| zrga family zinc uptake protein | CE139_RS24555 | Not Available | Positive | 5331683 - 5332240 | 19477.7 |
| abc transporter atp-binding protein | CE139_RS24560 | Not Available | Positive | 5332248 - 5332955 | 25486.7 |
| abc transporter permease | CE139_RS24565 | Not Available | Positive | 5332957 - 5334210 | 44778.0 |
| duf3299 domain-containing protein | CE139_RS24570 | Not Available | Positive | 5334224 - 5334718 | 18046.7 |
| ompw/alkl family protein | CE139_RS24575 | Not Available | Positive | 5334815 - 5335504 | 24603.3 |
| nad-dependent epimerase/dehydratase family protein | CE139_RS24580 | Not Available | Negative | 5335596 - 5336525 | 32852.0 |
| sugar nucleotide-binding protein | CE139_RS24585 | Not Available | Negative | 5336518 - 5337417 | 33145.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





