Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CE139_RS24295 | Not Available | Negative | 5277361 - 5278131 | 28621.5 |
| small ribosomal subunit biogenesis gtpase rsga | CE139_RS24300 | Not Available | Positive | 5278226 - 5279248 | 37605.9 |
| nitroreductase family protein | CE139_RS24305 | Not Available | Negative | 5279297 - 5279896 | 21869.7 |
| flagellar motor protein motb | CE139_RS24310 | Not Available | Negative | 5280060 - 5281220 | 41723.0 |
| flagellar motor stator protein mota | CE139_RS24315 | Not Available | Negative | 5281220 - 5282071 | 30194.3 |
| hdod domain-containing protein | CE139_RS24320 | Not Available | Positive | 5282189 - 5283706 | 56690.6 |
| rhodanese-like domain-containing protein | CE139_RS24325 | Not Available | Positive | 5283766 - 5284575 | 29247.6 |
| archaetidylserine decarboxylase | CE139_RS24330 | Not Available | Positive | 5284592 - 5285500 | 33055.3 |
| molecular chaperone | CE139_RS24335 | Not Available | Positive | 5285544 - 5287328 | 65685.0 |
| eal domain-containing protein | CE139_RS24340 | Not Available | Positive | 5287369 - 5289447 | 76402.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





