Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | CE139_RS24245 | Not Available | Negative | 5268327 - 5268788 | 16479.7 |
| nad(p)h-hydrate dehydratase | CE139_RS24250 | Not Available | Negative | 5268776 - 5270263 | 50664.3 |
| trna epoxyqueuosine(34) reductase queg | CE139_RS24255 | Not Available | Positive | 5270325 - 5271389 | 39665.6 |
| duf2931 family protein | CE139_RS24260 | Not Available | Negative | 5271406 - 5272098 | 25488.9 |
| duf2931 family protein | CE139_RS24265 | Not Available | Negative | 5272095 - 5272775 | 24820.2 |
| duf2931 family protein | CE139_RS24270 | Not Available | Negative | 5272787 - 5273467 | 24879.1 |
| duf2931 family protein | CE139_RS24275 | Not Available | Negative | 5273479 - 5274168 | 25131.9 |
| paar domain-containing protein | CE139_RS24280 | Not Available | Negative | 5274165 - 5276033 | 66119.2 |
| trimeric intracellular cation channel family protein | CE139_RS24285 | Not Available | Negative | 5276131 - 5276745 | 21783.4 |
| oligoribonuclease | CE139_RS24290 | Not Available | Negative | 5276762 - 5277310 | 20743.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





