Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2857 domain-containing protein | CE139_RS25945 | Not Available | Negative | 5256038 - 5257114 | 37765.8 |
| adenylosuccinate synthase | CE139_RS24200 | Not Available | Negative | 5257315 - 5258610 | 46808.1 |
| atp phosphoribosyltransferase regulatory subunit | CE139_RS24205 | Not Available | Negative | 5258689 - 5259876 | 42824.0 |
| protease modulator hflc | CE139_RS24210 | Not Available | Negative | 5260131 - 5261000 | 32983.5 |
| ftsh protease activity modulator hflk | CE139_RS24215 | Not Available | Negative | 5261000 - 5262187 | 43028.4 |
| ribosome rescue gtpase hflx | CE139_RS24220 | Not Available | Negative | 5262286 - 5263590 | 49248.9 |
| rna chaperone hfq | CE139_RS24225 | Not Available | Negative | 5263611 - 5263856 | 9118.96 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | CE139_RS24230 | Not Available | Negative | 5263944 - 5264924 | 35374.7 |
| dna mismatch repair endonuclease mutl | CE139_RS24235 | Not Available | Negative | 5264967 - 5266865 | 69582.0 |
| n-acetylmuramoyl-l-alanine amidase | CE139_RS24240 | Not Available | Negative | 5266858 - 5268288 | 51211.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





