Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose:h+ symporter permease | CE139_RS24050 | Not Available | Negative | 5222746 - 5224077 | 48433.0 |
| ribokinase | CE139_RS24055 | Not Available | Negative | 5224125 - 5225051 | 31969.3 |
| duf3100 domain-containing protein | CE139_RS24060 | Not Available | Negative | 5225290 - 5226615 | 46058.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 5226741 - 5226816 | Not Available |
| lysr family transcriptional regulator | CE139_RS24070 | Not Available | Positive | 5227090 - 5227992 | 32784.5 |
| m20 aminoacylase family protein | CE139_RS24075 | Not Available | Negative | 5228020 - 5229174 | 41212.5 |
| aldehyde dehydrogenase family protein | CE139_RS24080 | Not Available | Negative | 5229178 - 5230695 | 53740.9 |
| duf2857 domain-containing protein | CE139_RS24085 | Not Available | Negative | 5230698 - 5231594 | 29633.8 |
| urea abc transporter substrate-binding protein | CE139_RS24090 | Not Available | Positive | 5231931 - 5233205 | 46549.5 |
| urea abc transporter permease subunit urtb | CE139_RS24095 | Not Available | Positive | 5233632 - 5235200 | 55071.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





