Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-3b c(17)-methyltransferase | CE139_RS24000 | Not Available | Negative | 5212667 - 5214337 | 58438.4 |
| precorrin-2 c(20)-methyltransferase | CE139_RS24005 | Not Available | Negative | 5214325 - 5215065 | 26548.4 |
| precorrin-8x methylmutase | CE139_RS24010 | Not Available | Negative | 5215065 - 5215691 | 21642.3 |
| precorrin-3b synthase | CE139_RS24015 | Not Available | Negative | 5215684 - 5216970 | 44552.9 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbie | CE139_RS24020 | Not Available | Positive | 5217069 - 5218271 | 41849.9 |
| cobalt-precorrin-6a reductase | CE139_RS24025 | Not Available | Positive | 5218613 - 5219335 | 25903.2 |
| precorrin-4 c(11)-methyltransferase | CE139_RS24030 | Not Available | Positive | 5219332 - 5220063 | 25867.3 |
| deoxyribose-phosphate aldolase | CE139_RS24035 | Not Available | Negative | 5220118 - 5220795 | 22975.6 |
| dna-binding transcriptional repressor deor | CE139_RS24040 | Not Available | Positive | 5220890 - 5221654 | 28363.2 |
| aldose 1-epimerase family protein | CE139_RS24045 | Not Available | Negative | 5221647 - 5222732 | 40174.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





