Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CE139_RS23950 | Not Available | Negative | 5200080 - 5200877 | 28621.8 |
| feccd family abc transporter permease | CE139_RS23955 | Not Available | Negative | 5200874 - 5201932 | 36757.3 |
| abc transporter substrate-binding protein | CE139_RS23960 | Not Available | Negative | 5201929 - 5203047 | 41099.3 |
| mfs transporter | CE139_RS23965 | Not Available | Negative | 5203348 - 5204679 | 46910.4 |
| autotransporter domain-containing protein | CE139_RS23970 | Not Available | Positive | 5205266 - 5208148 | 98075.8 |
| iclr family transcriptional regulator c-terminal domain-containing protein | CE139_RS23975 | Not Available | Negative | 5208174 - 5209028 | 30971.6 |
| duf962 domain-containing protein | CE139_RS23980 | Not Available | Positive | 5209171 - 5209689 | 18769.2 |
| abc transporter atp-binding protein | CE139_RS23985 | Not Available | Negative | 5209674 - 5210438 | 27312.1 |
| feccd family abc transporter permease | CE139_RS23990 | Not Available | Negative | 5210435 - 5211469 | 34769.8 |
| abc transporter substrate-binding protein | CE139_RS23995 | Not Available | Negative | 5211466 - 5212482 | 36249.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





