Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein pqqf | CE139_RS23850 | Not Available | Positive | 5178565 - 5180955 | 85640.9 |
| pyrroloquinoline quinone precursor peptide pqqa | CE139_RS23855 | Not Available | Positive | 5181139 - 5181210 | 2811.41 |
| pyrroloquinoline quinone biosynthesis protein pqqb | CE139_RS23860 | Not Available | Positive | 5181266 - 5182177 | 32863.3 |
| pyrroloquinoline-quinone synthase pqqc | CE139_RS23865 | Not Available | Positive | 5182183 - 5182932 | 29021.3 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | CE139_RS23870 | Not Available | Positive | 5182929 - 5183204 | 10181.2 |
| pyrroloquinoline quinone biosynthesis protein pqqe | CE139_RS23875 | Not Available | Positive | 5183227 - 5184378 | 43219.7 |
| gnat family n-acetyltransferase | CE139_RS23880 | Not Available | Positive | 5184542 - 5185066 | 19281.0 |
| ynce family protein | CE139_RS23885 | Not Available | Positive | 5185186 - 5186592 | 48795.3 |
| 4-carboxymuconolactone decarboxylase | CE139_RS23890 | Not Available | Negative | 5187450 - 5187845 | 14971.0 |
| 3-oxoadipate enol-lactonase | CE139_RS23895 | Not Available | Negative | 5187857 - 5188645 | 27996.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





