Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | CE139_RS23810 | Not Available | Negative | 5162341 - 5162775 | 15974.1 |
| ai-2e family transporter | CE139_RS23815 | Not Available | Negative | 5162775 - 5163785 | 36768.5 |
| diguanylate cyclase domain-containing protein | CE139_RS23820 | Not Available | Negative | 5164070 - 5165008 | 33909.8 |
| pas domain s-box protein | CE139_RS23825 | Not Available | Negative | 5165005 - 5169867 | 177351.0 |
| methyl-accepting chemotaxis protein | CE139_RS25920 | Not Available | Negative | 5170207 - 5170971 | 26733.3 |
| duf2857 domain-containing protein | CE139_RS25925 | Not Available | Negative | 5171065 - 5172129 | 37876.9 |
| methyl-accepting chemotaxis protein | CE139_RS25930 | Not Available | Negative | 5172217 - 5172981 | 26673.2 |
| duf2857 domain-containing protein | CE139_RS25935 | Not Available | Negative | 5173075 - 5174109 | 37153.9 |
| aec family transporter | CE139_RS23840 | Not Available | Negative | 5174294 - 5175235 | 33135.7 |
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | CE139_RS23845 | Not Available | Positive | 5175569 - 5178001 | 86813.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





