Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pa3496 family putative envelope integrity protein | CE139_RS25120 | Not Available | Positive | 431507 - 431728 | 8778.59 |
| lysr family transcriptional regulator | CE139_RS01960 | Not Available | Negative | 431658 - 432632 | 35329.8 |
| acetyl-coa carboxylase biotin carboxylase subunit | CE139_RS01965 | Not Available | Positive | 432771 - 434186 | 51919.3 |
| sodium-extruding oxaloacetate decarboxylase subunit alpha | CE139_RS01970 | Not Available | Positive | 434200 - 436005 | 65677.8 |
| sdr family nad(p)-dependent oxidoreductase | CE139_RS25190 | Not Available | Negative | 436062 - 438305 | 83792.5 |
| arac family transcriptional regulator | CE139_RS01980 | Not Available | Positive | 438477 - 439526 | 37972.1 |
| hypothetical protein | CE139_RS25195 | Not Available | Positive | 439654 - 439785 | 5027.23 |
| metal abc transporter substrate-binding protein | CE139_RS01985 | Not Available | Positive | 439983 - 440882 | 32745.2 |
| metal abc transporter atp-binding protein | CE139_RS01990 | Not Available | Positive | 440879 - 441640 | 27660.5 |
| metal abc transporter permease | CE139_RS01995 | Not Available | Positive | 441640 - 442494 | 29709.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





