Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00645 family protein | CE139_RS23610 | Not Available | Negative | 5116115 - 5116603 | 18257.8 |
| hypothetical protein | CE139_RS23615 | Not Available | Negative | 5116684 - 5117025 | 12534.3 |
| lon protease family protein | CE139_RS23620 | Not Available | Negative | 5117187 - 5119631 | 90124.2 |
| hypothetical protein | CE139_RS23625 | Not Available | Positive | 5119861 - 5120205 | 12803.0 |
| eama family transporter | CE139_RS23630 | Not Available | Positive | 5120275 - 5121138 | 29909.9 |
| gluconokinase | CE139_RS23635 | Not Available | Positive | 5121180 - 5121674 | 18166.8 |
| thymidylate synthase | CE139_RS23640 | Not Available | Negative | 5121692 - 5122486 | 30148.1 |
| abc transporter permease subunit | CE139_RS23645 | Not Available | Negative | 5122615 - 5123511 | 32791.9 |
| abc transporter permease subunit | CE139_RS23650 | Not Available | Negative | 5123508 - 5124416 | 33680.6 |
| polyamine abc transporter atp-binding protein | CE139_RS23655 | Not Available | Negative | 5124413 - 5125567 | 42567.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





