Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| obg family gtpase cgta | CE139_RS23560 | Not Available | Negative | 5109449 - 5110660 | 44095.1 |
| 50s ribosomal protein l27 | CE139_RS23565 | Not Available | Negative | 5110783 - 5111043 | 9148.1 |
| 50s ribosomal protein l21 | CE139_RS23570 | Not Available | Negative | 5111070 - 5111384 | 11621.2 |
| polyprenyl synthetase family protein | CE139_RS23575 | Not Available | Positive | 5111785 - 5112759 | 34878.8 |
| hypothetical protein | CE139_RS23580 | Not Available | Positive | 5112897 - 5113151 | 9758.69 |
| Ncrna_class:other | Not Available | Not Available | Positive | 5113164 - 5113239 | Not Available |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CE139_RS23590 | Not Available | Negative | 5113301 - 5113918 | 22052.1 |
| duf2256 domain-containing protein | CE139_RS23595 | Not Available | Negative | 5113960 - 5114118 | 6214.45 |
| cryptochrome/photolyase family protein | CE139_RS23600 | Not Available | Negative | 5114115 - 5115665 | 59037.3 |
| duf6482 family protein | CE139_RS23605 | Not Available | Negative | 5115662 - 5115967 | 11310.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





