Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | CE139_RS25485 | Not Available | Positive | 5096012 - 5099911 | 139018.0 |
| type iv pilin protein | CE139_RS23515 | Not Available | Positive | 5099908 - 5100366 | 16286.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CE139_RS23520 | Not Available | Negative | 5100382 - 5101326 | 34469.9 |
| peptidylprolyl isomerase | CE139_RS23525 | Not Available | Negative | 5101361 - 5101807 | 15806.7 |
| signal peptidase ii | CE139_RS23530 | Not Available | Negative | 5101800 - 5102303 | 18857.2 |
| isoleucine--trna ligase | CE139_RS23535 | Not Available | Negative | 5102296 - 5105130 | 105059.0 |
| bifunctional riboflavin kinase/fad synthetase | CE139_RS23540 | Not Available | Negative | 5105132 - 5106079 | 34818.1 |
| murein biosynthesis integral membrane protein murj | CE139_RS23545 | Not Available | Negative | 5106159 - 5107697 | 56016.7 |
| 30s ribosomal protein s20 | CE139_RS23550 | Not Available | Positive | 5107941 - 5108219 | 10048.3 |
| glutamate 5-kinase | CE139_RS23555 | Not Available | Negative | 5108315 - 5109433 | 39669.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





