Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad+ synthase | CE139_RS23460 | Not Available | Negative | 5086827 - 5088449 | 59665.3 |
| pp0621 family protein | CE139_RS23465 | Not Available | Positive | 5088581 - 5088829 | 9526.78 |
| sensor histidine kinase | CE139_RS23470 | Not Available | Positive | 5088813 - 5090387 | 57402.6 |
| sigma-54-dependent transcriptional regulator | CE139_RS23475 | Not Available | Positive | 5090390 - 5091730 | 48823.0 |
| glycine oxidase thio | CE139_RS23480 | Not Available | Negative | 5091731 - 5092834 | 39385.9 |
| gsph/fimt family pseudopilin | CE139_RS23485 | Not Available | Positive | 5092930 - 5093454 | 19145.8 |
| gsph/fimt family pseudopilin | CE139_RS23490 | Not Available | Positive | 5093560 - 5094036 | 16942.4 |
| type iv pilus modification protein pilv | CE139_RS23495 | Not Available | Positive | 5094033 - 5094524 | 17321.6 |
| pilw family protein | CE139_RS23500 | Not Available | Positive | 5094521 - 5095528 | 36127.8 |
| pilx n-terminal domain-containing pilus assembly protein | CE139_RS23505 | Not Available | Positive | 5095525 - 5095995 | 16744.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





