Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsba family protein | CE139_RS23360 | Not Available | Positive | 5067763 - 5068470 | 25566.6 |
| nucleotide-binding domain-containing protein | CE139_RS23365 | Not Available | Negative | 5068590 - 5069942 | 50270.1 |
| hypothetical protein | CE139_RS23370 | Not Available | Negative | 5069939 - 5070490 | 19996.7 |
| hypothetical protein | CE139_RS23375 | Not Available | Negative | 5070526 - 5070891 | 13369.0 |
| tigr03757 family integrating conjugative element protein | CE139_RS23380 | Not Available | Positive | 5071173 - 5071514 | 12205.5 |
| tigr03756 family integrating conjugative element protein | CE139_RS23385 | Not Available | Positive | 5071511 - 5072458 | 33775.7 |
| integrating conjugative element protein | CE139_RS23390 | Not Available | Positive | 5072476 - 5073849 | 47431.3 |
| hypothetical protein | CE139_RS23395 | Not Available | Positive | 5073852 - 5074214 | 13990.4 |
| conjugal transfer protein trag n-terminal domain-containing protein | CE139_RS23400 | Not Available | Positive | 5074224 - 5075804 | 57217.6 |
| duf3742 family protein | CE139_RS25915 | Not Available | Negative | 5075838 - 5076203 | 12678.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





