Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS01910 | Not Available | Negative | 421767 - 421934 | 6078.61 |
| acyl-coa thioesterase | CE139_RS01915 | Not Available | Negative | 421949 - 422431 | 18061.7 |
| sdr family nad(p)-dependent oxidoreductase | CE139_RS01920 | Not Available | Negative | 422491 - 423249 | 26613.6 |
| smi1/knr4 family protein | CE139_RS01925 | Not Available | Negative | 423318 - 423719 | 15337.7 |
| tim44 domain-containing protein | CE139_RS01930 | Not Available | Negative | 423900 - 424757 | 30470.6 |
| cation:proton antiporter | CE139_RS01935 | Not Available | Positive | 425029 - 426789 | 63406.6 |
| eama family transporter | CE139_RS01940 | Not Available | Negative | 426970 - 427398 | 14962.9 |
| dna helicase ii | CE139_RS01945 | Not Available | Negative | 427401 - 429569 | 81318.8 |
| hcp family type vi secretion system effector | CE139_RS01950 | Not Available | Negative | 429704 - 430222 | 19280.7 |
| transcriptional regulator hexr | CE139_RS01955 | Not Available | Positive | 430563 - 431432 | 31390.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





