Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | CE139_RS23115 | Not Available | Negative | 5017007 - 5020918 | 137427.0 |
| pilx n-terminal domain-containing pilus assembly protein | CE139_RS23120 | Not Available | Negative | 5020915 - 5021520 | 20870.1 |
| pilw family protein | CE139_RS23125 | Not Available | Negative | 5021517 - 5022302 | 27769.3 |
| type iv pilus modification protein pilv | CE139_RS23130 | Not Available | Negative | 5022306 - 5022902 | 21032.6 |
| gsph/fimt family pseudopilin | CE139_RS23135 | Not Available | Negative | 5022903 - 5023436 | 18332.2 |
| Trna-lys | Not Available | Not Available | Positive | 5023707 - 5023780 | Not Available |
| para family protein | CE139_RS23145 | Not Available | Positive | 5023844 - 5024704 | 31630.3 |
| duf2786 domain-containing protein | CE139_RS23150 | Not Available | Positive | 5024706 - 5025407 | 25787.1 |
| replicative dna helicase | CE139_RS23155 | Not Available | Positive | 5025404 - 5026816 | 51702.1 |
| hypothetical protein | CE139_RS23160 | Not Available | Positive | 5026813 - 5027244 | 15672.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





