Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | CE139_RS23065 | Not Available | Negative | 5006513 - 5007730 | 44160.6 |
| type iv-a pilus assembly atpase pilb | CE139_RS23070 | Not Available | Negative | 5007940 - 5009634 | 62270.3 |
| pilin | CE139_RS23075 | Not Available | Positive | 5009848 - 5010324 | 15844.1 |
| sdr family oxidoreductase | CE139_RS23080 | Not Available | Negative | 5010372 - 5011391 | 36178.8 |
| Trna-thr | Not Available | Not Available | Positive | 5011683 - 5011758 | Not Available |
| ubiquinol oxidase subunit ii | CE139_RS23090 | Not Available | Positive | 5012165 - 5013088 | 34146.4 |
| cytochrome o ubiquinol oxidase subunit i | CE139_RS23095 | Not Available | Positive | 5013092 - 5015080 | 74241.8 |
| cytochrome o ubiquinol oxidase subunit iii | CE139_RS23100 | Not Available | Positive | 5015085 - 5015699 | 22666.6 |
| cytochrome o ubiquinol oxidase subunit iv | CE139_RS23105 | Not Available | Positive | 5015699 - 5016037 | 12611.8 |
| heme o synthase | CE139_RS23110 | Not Available | Positive | 5016052 - 5016936 | 31380.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





