Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase family protein | CE139_RS23015 | Not Available | Positive | 4990370 - 4991545 | 43576.2 |
| peptide chain release factor 3 | CE139_RS23020 | Not Available | Positive | 4991639 - 4993222 | 59845.6 |
| dna recombination protein rmuc | CE139_RS23025 | Not Available | Negative | 4993325 - 4994908 | 60186.4 |
| exodeoxyribonuclease v subunit alpha | CE139_RS23030 | Not Available | Negative | 4994982 - 4997063 | 75136.5 |
| exodeoxyribonuclease v subunit beta | CE139_RS23035 | Not Available | Negative | 4997056 - 5000718 | 135891.0 |
| exodeoxyribonuclease v subunit gamma | CE139_RS23040 | Not Available | Negative | 5000715 - 5004146 | 127930.0 |
| hypothetical protein | CE139_RS23045 | Not Available | Positive | 5004329 - 5004826 | 17598.2 |
| dna gyrase inhibitor yacg | CE139_RS23050 | Not Available | Negative | 5004839 - 5005036 | 7208.27 |
| dephospho-coa kinase | CE139_RS23055 | Not Available | Negative | 5005033 - 5005644 | 21791.1 |
| prepilin peptidase | CE139_RS23060 | Not Available | Negative | 5005641 - 5006513 | 31642.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





