Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CE139_RS22765 | Not Available | Negative | 4942248 - 4943132 | 32242.0 |
| dmt family transporter | CE139_RS22770 | Not Available | Positive | 4943217 - 4943549 | 11416.5 |
| fad-dependent oxidoreductase | CE139_RS22775 | Not Available | Positive | 4943612 - 4944787 | 41785.5 |
| aldo/keto reductase | CE139_RS22780 | Not Available | Positive | 4944784 - 4945599 | 29002.7 |
| metal abc transporter atpase | CE139_RS22785 | Not Available | Positive | 4945698 - 4946594 | 33796.8 |
| 2-hydroxyacid dehydrogenase | CE139_RS22790 | Not Available | Negative | 4946602 - 4947558 | 33455.7 |
| sdr family oxidoreductase | CE139_RS22795 | Not Available | Negative | 4947579 - 4948343 | 26807.4 |
| fumarylacetoacetate hydrolase family protein | CE139_RS22800 | Not Available | Negative | 4948340 - 4949089 | 26153.5 |
| mfs transporter | CE139_RS22805 | Not Available | Negative | 4949275 - 4950609 | 47979.9 |
| helix-turn-helix transcriptional regulator | CE139_RS22810 | Not Available | Positive | 4950942 - 4951850 | 34361.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





