Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdod domain-containing protein | CE139_RS22665 | Not Available | Negative | 4917223 - 4918047 | 30691.8 |
| type 1 glutamine amidotransferase domain-containing protein | CE139_RS22670 | Not Available | Positive | 4918268 - 4918807 | 18849.2 |
| lon peptidase substrate-binding domain-containing protein | CE139_RS22675 | Not Available | Negative | 4919123 - 4919713 | 21703.1 |
| membrane integrity-associated transporter subunit pqic | CE139_RS22680 | Not Available | Negative | 4919803 - 4920510 | 25855.0 |
| dna topoisomerase iv subunit a | CE139_RS22685 | Not Available | Negative | 4920596 - 4922848 | 83010.9 |
| dna topoisomerase iv subunit b | CE139_RS22690 | Not Available | Negative | 4922968 - 4924866 | 69090.7 |
| yqia/ycfp family alpha/beta fold hydrolase | CE139_RS22695 | Not Available | Negative | 4924874 - 4925482 | 22670.0 |
| 3',5'-cyclic-amp phosphodiesterase | CE139_RS22700 | Not Available | Negative | 4925576 - 4926400 | 29997.7 |
| duf1249 domain-containing protein | CE139_RS22705 | Not Available | Negative | 4926523 - 4926978 | 17297.3 |
| nudix domain-containing protein | CE139_RS22710 | Not Available | Negative | 4926969 - 4927589 | 22871.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





