Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit alpha | CE139_RS01860 | Not Available | Positive | 410652 - 412196 | 55206.3 |
| f0f1 atp synthase subunit gamma | CE139_RS01865 | Not Available | Positive | 412245 - 413108 | 31022.7 |
| f0f1 atp synthase subunit beta | CE139_RS01870 | Not Available | Positive | 413139 - 414515 | 49715.7 |
| f0f1 atp synthase subunit epsilon | CE139_RS01875 | Not Available | Positive | 414554 - 414979 | 14782.6 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | CE139_RS01880 | Not Available | Positive | 415134 - 416501 | 47932.2 |
| deor/glpr family dna-binding transcription regulator | CE139_RS01885 | Not Available | Positive | 416556 - 417326 | 28318.1 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | CE139_RS01890 | Not Available | Positive | 417393 - 419228 | 66619.0 |
| nadh:ubiquinone oxidoreductase | CE139_RS01895 | Not Available | Negative | 419247 - 419597 | 12873.5 |
| cobw family gtp-binding protein | CE139_RS01900 | Not Available | Positive | 419649 - 420605 | 34750.1 |
| energy transducer tonb | CE139_RS01905 | Not Available | Positive | 420737 - 421711 | 34323.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





