Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf523 domain-containing protein | CE139_RS22615 | Not Available | Negative | 4907928 - 4908422 | 16917.3 |
| 2og-fe(ii) oxygenase | CE139_RS22620 | Not Available | Negative | 4908454 - 4909086 | 24167.8 |
| duf2059 domain-containing protein | CE139_RS22625 | Not Available | Positive | 4909265 - 4910002 | 26060.9 |
| alpha/beta hydrolase | CE139_RS22630 | Not Available | Negative | 4910009 - 4910947 | 35487.7 |
| marr family transcriptional regulator | CE139_RS22635 | Not Available | Positive | 4911130 - 4911600 | 17689.3 |
| efflux transporter outer membrane subunit | CE139_RS22640 | Not Available | Positive | 4911604 - 4913058 | 51861.0 |
| efflux rnd transporter periplasmic adaptor subunit | CE139_RS22645 | Not Available | Positive | 4913075 - 4914286 | 43806.8 |
| dha2 family efflux mfs transporter permease subunit | CE139_RS22650 | Not Available | Positive | 4914342 - 4915868 | 54893.9 |
| c-type cytochrome | CE139_RS22655 | Not Available | Negative | 4915877 - 4916251 | 13514.0 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | CE139_RS22660 | Not Available | Negative | 4916248 - 4917060 | 29968.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





