Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | CE139_RS22520 | Not Available | Negative | 4888736 - 4889587 | 30437.8 |
| penicillin-binding protein activator | CE139_RS22525 | Not Available | Positive | 4889711 - 4891498 | 64139.6 |
| yran family protein | CE139_RS22530 | Not Available | Positive | 4891495 - 4891869 | 14063.9 |
| phosphoheptose isomerase | CE139_RS22535 | Not Available | Positive | 4891902 - 4892495 | 21379.6 |
| bon domain-containing protein | CE139_RS22540 | Not Available | Positive | 4892492 - 4893064 | 20382.5 |
| duf2171 domain-containing protein | CE139_RS22545 | Not Available | Negative | 4893127 - 4893363 | 8666.95 |
| sulfite oxidase-like oxidoreductase | CE139_RS22550 | Not Available | Positive | 4893512 - 4894165 | 25089.5 |
| hypothetical protein | CE139_RS22555 | Not Available | Negative | 4894173 - 4894577 | 14723.8 |
| n-acetylmuramoyl-l-alanine amidase | CE139_RS22560 | Not Available | Negative | 4894574 - 4895794 | 43839.0 |
| osmotically-inducible lipoprotein osme | CE139_RS22565 | Not Available | Positive | 4896074 - 4896412 | 12220.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





