Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipid ii flippase ftsw | CE139_RS22470 | Not Available | Negative | 4878134 - 4879333 | 43958.9 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | CE139_RS22475 | Not Available | Negative | 4879333 - 4880676 | 47960.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | CE139_RS22480 | Not Available | Negative | 4880682 - 4881764 | 39657.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | CE139_RS22485 | Not Available | Negative | 4881764 - 4883131 | 47197.2 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CE139_RS22490 | Not Available | Negative | 4883124 - 4884593 | 51056.0 |
| peptidoglycan d,d-transpeptidase ftsi family protein | CE139_RS22495 | Not Available | Negative | 4884590 - 4886275 | 60731.0 |
| cell division protein ftsl | CE139_RS22500 | Not Available | Negative | 4886335 - 4886628 | 10828.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | CE139_RS22505 | Not Available | Negative | 4886625 - 4887566 | 34484.3 |
| division/cell wall cluster transcriptional repressor mraz | CE139_RS22510 | Not Available | Negative | 4887569 - 4888024 | 17196.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 4888314 - 4888669 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





