Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilz domain-containing protein | CE139_RS22370 | Not Available | Negative | 4860244 - 4860606 | 13896.6 |
| tetratricopeptide repeat protein | CE139_RS22375 | Not Available | Negative | 4860663 - 4861049 | 14434.3 |
| pyruvate kinase | CE139_RS22380 | Not Available | Positive | 4861246 - 4862697 | 52420.2 |
| hypothetical protein | CE139_RS22385 | Not Available | Negative | 4862804 - 4862974 | 5856.35 |
| dead/deah box helicase | CE139_RS22390 | Not Available | Positive | 4863099 - 4865714 | 98192.1 |
| phosphate-starvation-inducible protein psie | CE139_RS22395 | Not Available | Negative | 4865793 - 4866266 | 17061.0 |
| sirb1 family protein | CE139_RS22400 | Not Available | Positive | 4866474 - 4867280 | 29979.2 |
| lrgb family protein | CE139_RS22405 | Not Available | Negative | 4867277 - 4867966 | 24609.1 |
| cida/lrga family protein | CE139_RS22410 | Not Available | Negative | 4867959 - 4868342 | 14166.1 |
| flavodoxin | CE139_RS22415 | Not Available | Negative | 4868455 - 4868904 | 15975.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





