Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1631 domain-containing protein | CE139_RS22320 | Not Available | Negative | 4850064 - 4852250 | 81446.3 |
| carboxylating nicotinate-nucleotide diphosphorylase | CE139_RS22325 | Not Available | Positive | 4852536 - 4853384 | 29834.9 |
| hypothetical protein | CE139_RS22330 | Not Available | Positive | 4853503 - 4853724 | 8453.92 |
| hypothetical protein | CE139_RS22335 | Not Available | Negative | 4853712 - 4853921 | 7163.19 |
| formyltetrahydrofolate deformylase | CE139_RS22340 | Not Available | Negative | 4853935 - 4854786 | 32271.7 |
| histone-like nucleoid-structuring protein mvat | CE139_RS22345 | Not Available | Positive | 4855086 - 4855469 | 14768.6 |
| exodeoxyribonuclease i | CE139_RS22350 | Not Available | Negative | 4855717 - 4857162 | 55725.6 |
| duf4350 domain-containing protein | CE139_RS22355 | Not Available | Positive | 4857349 - 4858473 | 41103.2 |
| aaa family atpase | CE139_RS22360 | Not Available | Positive | 4858470 - 4859465 | 35151.7 |
| hypothetical protein | CE139_RS22365 | Not Available | Positive | 4859462 - 4860259 | 28842.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





