Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloride channel protein | CE139_RS22270 | Not Available | Negative | 4837757 - 4839112 | 47423.9 |
| pts fructose-like transporter subunit iib | CE139_RS22275 | Not Available | Negative | 4839186 - 4840943 | 59974.1 |
| 1-phosphofructokinase | CE139_RS22280 | Not Available | Negative | 4840940 - 4841908 | 33191.9 |
| phosphoenolpyruvate--protein phosphotransferase | CE139_RS22285 | Not Available | Negative | 4841905 - 4844787 | 102294.0 |
| catabolite repressor/activator | CE139_RS22290 | Not Available | Positive | 4845069 - 4846061 | 36272.4 |
| tatd family hydrolase | CE139_RS22295 | Not Available | Positive | 4846058 - 4846855 | 29529.6 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | CE139_RS22300 | Not Available | Negative | 4846852 - 4847412 | 20645.1 |
| fad/fmn-containing dehydrogenase | CE139_RS22305 | Not Available | Negative | 4847412 - 4847888 | 17591.6 |
| mosc domain-containing protein | CE139_RS22310 | Not Available | Positive | 4847972 - 4848451 | 17519.5 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS22315 | Not Available | Positive | 4848709 - 4850001 | 46784.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





