Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative bifunctional diguanylate cyclase/phosphodiesterase | CE139_RS22170 | Not Available | Negative | 4812052 - 4814370 | 84449.4 |
| methylamine utilization protein | CE139_RS22175 | Not Available | Negative | 4814354 - 4815001 | 22913.1 |
| endopeptidase la | CE139_RS22180 | Not Available | Positive | 4815247 - 4817637 | 88903.5 |
| protease inhibitor i42 family protein | CE139_RS22185 | Not Available | Positive | 4817699 - 4818091 | 14449.0 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | CE139_RS22190 | Not Available | Positive | 4818155 - 4818892 | 27120.7 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | CE139_RS22195 | Not Available | Positive | 4818889 - 4819857 | 36254.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4820335 - 4820450 | Not Available |
| hypothetical protein | CE139_RS22205 | Not Available | Negative | 4821285 - 4821662 | 12584.5 |
| outer membrane protein ompk | CE139_RS22210 | Not Available | Positive | 4821933 - 4822730 | 29771.7 |
| uracil-xanthine permease family protein | CE139_RS22215 | Not Available | Positive | 4822800 - 4824176 | 47416.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





