Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CE139_RS01810 | Not Available | Positive | 401700 - 403064 | 48219.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | CE139_RS01815 | Not Available | Positive | 403509 - 405401 | 69045.8 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | CE139_RS01820 | Not Available | Positive | 405401 - 406045 | 23303.0 |
| para family protein | CE139_RS01825 | Not Available | Positive | 406054 - 406848 | 28509.6 |
| parb/repb/spo0j family partition protein | CE139_RS01830 | Not Available | Positive | 406858 - 407730 | 31859.8 |
| f0f1 atp synthase subunit i | CE139_RS01835 | Not Available | Positive | 407877 - 408281 | 14567.3 |
| f0f1 atp synthase subunit a | CE139_RS01840 | Not Available | Positive | 408298 - 409161 | 31770.7 |
| f0f1 atp synthase subunit c | CE139_RS01845 | Not Available | Positive | 409301 - 409558 | 8609.06 |
| f0f1 atp synthase subunit b | CE139_RS01850 | Not Available | Positive | 409614 - 410084 | 16850.2 |
| f0f1 atp synthase subunit delta | CE139_RS01855 | Not Available | Positive | 410097 - 410633 | 19112.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





