Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2059 domain-containing protein | CE139_RS22070 | Not Available | Negative | 4795185 - 4795721 | 19340.3 |
| class ii fumarate hydratase | CE139_RS22075 | Not Available | Positive | 4795894 - 4797288 | 49221.9 |
| nad(p)h-dependent oxidoreductase | CE139_RS22080 | Not Available | Positive | 4797275 - 4797895 | 23152.5 |
| rbbp9/yden family alpha/beta hydrolase | CE139_RS22085 | Not Available | Positive | 4798107 - 4798667 | 20581.4 |
| molybdopterin-binding protein | CE139_RS22090 | Not Available | Negative | 4798924 - 4799139 | 7604.38 |
| aliphatic sulfonates abc transporter atp-binding protein | CE139_RS22095 | Not Available | Negative | 4799163 - 4799972 | 29327.8 |
| aliphatic sulfonate abc transporter permease ssuc | CE139_RS22100 | Not Available | Negative | 4799969 - 4800757 | 28377.3 |
| fmnh2-dependent alkanesulfonate monooxygenase | CE139_RS22105 | Not Available | Negative | 4800769 - 4801917 | 41411.4 |
| sulfonate abc transporter substrate-binding protein | CE139_RS22110 | Not Available | Negative | 4801941 - 4802906 | 34525.5 |
| nadph-dependent fmn reductase | CE139_RS22115 | Not Available | Negative | 4802922 - 4803509 | 20771.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





