Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase accessory protein fdhe | CE139_RS22020 | Not Available | Negative | 4783771 - 4784688 | 33034.5 |
| formate dehydrogenase subunit gamma | CE139_RS22025 | Not Available | Negative | 4784860 - 4785483 | 23953.9 |
| formate dehydrogenase subunit beta | CE139_RS22030 | Not Available | Negative | 4785530 - 4786489 | 34732.2 |
| formate dehydrogenase-n subunit alpha | CE139_RS22035 | Not Available | Negative | 4786489 - 4789569 | 113638.0 |
| sulp family inorganic anion transporter | CE139_RS22040 | Not Available | Positive | 4790064 - 4791524 | 51769.0 |
| universal stress protein | CE139_RS22045 | Not Available | Positive | 4791585 - 4792430 | 30584.0 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | CE139_RS22050 | Not Available | Negative | 4792448 - 4792858 | 15203.3 |
| dsba family protein | CE139_RS22055 | Not Available | Negative | 4792861 - 4793496 | 23200.8 |
| rhodanese-related sulfurtransferase | CE139_RS22060 | Not Available | Negative | 4793498 - 4794451 | 35784.5 |
| bola family protein | CE139_RS22065 | Not Available | Negative | 4794751 - 4795062 | 11449.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





