Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter atp-binding protein | CE139_RS21975 | Not Available | Positive | 4769447 - 4770256 | 28284.4 |
| duf2857 domain-containing protein | CE139_RS25465 | Not Available | Positive | 4770250 - 4771062 | 28811.2 |
| phosphonate abc transporter, permease protein phne | CE139_RS25470 | Not Available | Positive | 4771114 - 4771845 | 25101.3 |
| l-seryl-trna(sec) selenium transferase | CE139_RS21985 | Not Available | Negative | 4772017 - 4773426 | 50538.6 |
| lipase | CE139_RS21990 | Not Available | Positive | 4773705 - 4774796 | 37302.6 |
| Ncrna_class:other | Not Available | Not Available | Positive | 4774858 - 4774932 | Not Available |
| ankyrin repeat domain-containing protein | CE139_RS22000 | Not Available | Positive | 4775056 - 4775580 | 18369.2 |
| sdia-regulated domain-containing protein | CE139_RS22005 | Not Available | Negative | 4775800 - 4776723 | 34812.5 |
| pls/posa family non-ribosomal peptide synthetase | CE139_RS22010 | Not Available | Negative | 4776791 - 4780786 | 143130.0 |
| catalase/peroxidase hpi | CE139_RS22015 | Not Available | Negative | 4781017 - 4783278 | 82520.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





