Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphodiesterase | CE139_RS21875 | Not Available | Positive | 4743942 - 4744232 | 10930.1 |
| glycerophosphodiester phosphodiesterase | CE139_RS21880 | Not Available | Positive | 4744241 - 4744957 | 26517.0 |
| si-specific nad(p)(+) transhydrogenase | CE139_RS21885 | Not Available | Negative | 4745269 - 4746663 | 51231.7 |
| glyceraldehyde-3-phosphate dehydrogenase | CE139_RS21890 | Not Available | Negative | 4746874 - 4748316 | 52161.4 |
| transcription-repair coupling factor | CE139_RS21895 | Not Available | Positive | 4748471 - 4751920 | 128308.0 |
| s-methyl-5'-thioinosine phosphorylase | CE139_RS21900 | Not Available | Negative | 4751967 - 4752707 | 26442.8 |
| beta-n-acetylhexosaminidase | CE139_RS21905 | Not Available | Negative | 4752719 - 4753711 | 35769.2 |
| tetr/acrr family transcriptional regulator | CE139_RS21910 | Not Available | Negative | 4753792 - 4754502 | 26568.2 |
| transcriptional repressor lexa | CE139_RS21915 | Not Available | Positive | 4754738 - 4755349 | 22058.8 |
| sos-induced cell division inhibitor sula | CE139_RS21920 | Not Available | Positive | 4755531 - 4756031 | 18322.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





