Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly transcriptional regulator iscr | CE139_RS21775 | Not Available | Negative | 4726907 - 4727404 | 17785.3 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | CE139_RS21780 | Not Available | Negative | 4727489 - 4728277 | 28716.6 |
| inositol-phosphate phosphatase | CE139_RS21785 | Not Available | Positive | 4728418 - 4729233 | 29493.2 |
| clpxp protease specificity-enhancing factor | CE139_RS21790 | Not Available | Negative | 4729328 - 4729732 | 14458.0 |
| glutathione s-transferase n-terminal domain-containing protein | CE139_RS21795 | Not Available | Negative | 4729744 - 4730358 | 23450.6 |
| cytochrome c1 | CE139_RS21800 | Not Available | Negative | 4730591 - 4731256 | 24296.5 |
| cytochrome b | CE139_RS21805 | Not Available | Negative | 4731253 - 4732446 | 43550.3 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | CE139_RS21810 | Not Available | Negative | 4732443 - 4733021 | 20319.2 |
| udp-n-acetylmuramate dehydrogenase | CE139_RS21815 | Not Available | Negative | 4733018 - 4734040 | 36228.6 |
| low molecular weight protein-tyrosine-phosphatase | CE139_RS21820 | Not Available | Negative | 4734030 - 4734497 | 16655.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





