Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis/stability protein pilw | CE139_RS21725 | Not Available | Negative | 4719384 - 4720154 | 29035.3 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | CE139_RS21730 | Not Available | Negative | 4720165 - 4721304 | 41974.9 |
| nucleoside-diphosphate kinase | CE139_RS21735 | Not Available | Negative | 4721398 - 4721829 | 15553.5 |
| fe-s cluster assembly protein iscx | CE139_RS21740 | Not Available | Negative | 4721921 - 4722121 | 7622.91 |
| isc system 2fe-2s type ferredoxin | CE139_RS21745 | Not Available | Negative | 4722133 - 4722471 | 12188.4 |
| fe-s protein assembly chaperone hsca | CE139_RS21750 | Not Available | Negative | 4722479 - 4724338 | 65807.9 |
| co-chaperone hscb | CE139_RS21755 | Not Available | Negative | 4724384 - 4724905 | 20327.9 |
| iron-sulfur cluster assembly protein isca | CE139_RS21760 | Not Available | Negative | 4724914 - 4725237 | 11717.8 |
| fe-s cluster assembly scaffold iscu | CE139_RS21765 | Not Available | Negative | 4725247 - 4725633 | 13677.4 |
| iscs subfamily cysteine desulfurase | CE139_RS21770 | Not Available | Negative | 4725661 - 4726875 | 44980.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





